Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | CFA70_RS16380 | Not Available | Negative | 3190827 - 3191159 | 11891.4 |
| small heat shock chaperone ibpa | CFA70_RS16385 | Not Available | Positive | 3191464 - 3191877 | 15692.5 |
| small heat shock chaperone ibpb | CFA70_RS16390 | Not Available | Positive | 3191970 - 3192398 | 16036.9 |
| putative transporter | CFA70_RS16395 | Not Available | Positive | 3192523 - 3194184 | 58932.7 |
| yidh family protein | CFA70_RS16400 | Not Available | Positive | 3194370 - 3194717 | 12759.0 |
| duf202 domain-containing protein | CFA70_RS16405 | Not Available | Positive | 3194707 - 3195069 | 13691.0 |
| radical sam protein | CFA70_RS16410 | Not Available | Positive | 3195066 - 3195596 | 20322.5 |
| d-serine ammonia-lyase | CFA70_RS16415 | Not Available | Negative | 3195599 - 3196921 | 47526.7 |
| d-serine transporter dsdx | CFA70_RS16420 | Not Available | Negative | 3196939 - 3198276 | 46919.8 |
| dna-binding transcriptional regulator dsdc | CFA70_RS16425 | Not Available | Positive | 3198506 - 3199432 | 34893.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

