Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 3124710 - 3124785 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3124838 - 3124914 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3124970 - 3125085 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3125178 - 3128085 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3128307 - 3128382 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3128468 - 3130009 | Not Available |
| fadr/gntr family transcriptional regulator | CFA70_RS16105 | Not Available | Positive | 3130488 - 3131192 | 26583.2 |
| multidrug transporter subunit mdtd | CFA70_RS16110 | Not Available | Positive | 3131194 - 3132621 | 51395.0 |
| ribose operon transcriptional repressor rbsr | CFA70_RS16115 | Not Available | Negative | 3132587 - 3133579 | 36613.2 |
| ribokinase | CFA70_RS16120 | Not Available | Negative | 3133583 - 3134512 | 32047.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

