Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | CFA70_RS15820 | Not Available | Negative | 3073194 - 3074144 | 36735.9 |
| ysgd/corl family protein | CFA70_RS29680 | Not Available | Negative | 3074298 - 3074354 | 2152.61 |
| dna helicase ii | CFA70_RS15825 | Not Available | Negative | 3074503 - 3076665 | 82042.8 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | CFA70_RS15830 | Not Available | Negative | 3076730 - 3077446 | 26765.1 |
| tyrosine recombinase xerc | CFA70_RS15835 | Not Available | Negative | 3077446 - 3078348 | 33660.6 |
| duf484 domain-containing protein | CFA70_RS15840 | Not Available | Negative | 3078345 - 3079052 | 26843.7 |
| diaminopimelate epimerase | CFA70_RS15845 | Not Available | Negative | 3079049 - 3079873 | 30285.4 |
| lps translocon maturation chaperone lptm | CFA70_RS15850 | Not Available | Negative | 3079923 - 3080126 | 7175.62 |
| iron donor protein cyay | CFA70_RS15855 | Not Available | Positive | 3080265 - 3080585 | 12218.0 |
| class i adenylate cyclase | CFA70_RS15860 | Not Available | Negative | 3080680 - 3083226 | 97383.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

