Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| der gtpase-activating protein yihi | CFA70_RS15570 | Not Available | Negative | 3022681 - 3023196 | 19188.5 |
| duf968 domain-containing protein | CFA70_RS29665 | Not Available | Negative | 3023362 - 3023496 | 4821.46 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CFA70_RS15580 | Not Available | Positive | 3023757 - 3024389 | 23511.4 |
| dna polymerase i | CFA70_RS15585 | Not Available | Negative | 3024723 - 3027509 | 103381.0 |
| acyltransferase | CFA70_RS15590 | Not Available | Positive | 3027873 - 3028808 | 36033.8 |
| thiol:disulfide interchange protein dsba | CFA70_RS15595 | Not Available | Negative | 3028822 - 3029445 | 22957.6 |
| serine/threonine protein kinase | CFA70_RS15600 | Not Available | Negative | 3029462 - 3030448 | 38305.5 |
| yihd family protein | CFA70_RS15605 | Not Available | Negative | 3030525 - 3030794 | 10291.5 |
| molybdenum cofactor guanylyltransferase moba | CFA70_RS15610 | Not Available | Positive | 3030864 - 3031448 | 21663.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | CFA70_RS15615 | Not Available | Positive | 3031445 - 3031948 | 18563.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

