Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphatase | CFA70_RS15510 | Not Available | Negative | 3011271 - 3011870 | 22785.0 |
| aldose epimerase | CFA70_RS15515 | Not Available | Negative | 3011961 - 3012851 | 33438.8 |
| is1-like element is1b family transposase | CFA70_RS15520 | Not Available | Negative | 3012935 - 3013632 | 26558.3 |
| duf968 domain-containing protein | CFA70_RS15525 | Not Available | Positive | 3013688 - 3014374 | 25093.1 |
| ribosome-dependent gtpase typa | CFA70_RS15530 | Not Available | Negative | 3014442 - 3016265 | 67369.6 |
| glutamate--ammonia ligase | CFA70_RS15540 | Not Available | Positive | 3016647 - 3018056 | 52009.9 |
| nitrogen regulation protein nr(ii) | CFA70_RS15550 | Not Available | Positive | 3018338 - 3019387 | 38364.3 |
| nitrogen regulation protein nr(i) | CFA70_RS15555 | Not Available | Positive | 3019398 - 3020807 | 52425.1 |
| yshb family small membrane protein | CFA70_RS15560 | Not Available | Positive | 3020919 - 3021029 | 3632.48 |
| oxygen-independent coproporphyrinogen iii oxidase | CFA70_RS15565 | Not Available | Negative | 3021119 - 3022492 | 52636.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

