Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | CFA70_RS15455 | Not Available | Positive | 3001544 - 3004594 | 111984.0 |
| formate dehydrogenase o subunit beta | CFA70_RS15460 | Not Available | Positive | 3004607 - 3005509 | 32965.0 |
| formate dehydrogenase cytochrome b556 subunit | CFA70_RS15465 | Not Available | Positive | 3005506 - 3006141 | 24665.7 |
| formate dehydrogenase accessory protein fdhe | CFA70_RS15470 | Not Available | Positive | 3006138 - 3007067 | 34829.7 |
| type ii toxin-antitoxin system vapc family toxin | CFA70_RS15475 | Not Available | Negative | 3007104 - 3007478 | 13675.7 |
| copg family transcriptional regulator | CFA70_RS15480 | Not Available | Negative | 3007478 - 3007720 | 9451.38 |
| alpha/beta hydrolase | CFA70_RS15485 | Not Available | Positive | 3007926 - 3008834 | 33496.8 |
| fatty acid biosynthesis protein faby | CFA70_RS15495 | Not Available | Negative | 3008985 - 3009926 | 35228.2 |
| d-aminoacyl-trna deacylase | CFA70_RS15500 | Not Available | Negative | 3009971 - 3010408 | 16033.1 |
| virulence factor brkb family protein | CFA70_RS15505 | Not Available | Negative | 3010405 - 3011277 | 32789.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

