Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | CFA70_RS15395 | Not Available | Positive | 2993276 - 2994745 | 54291.7 |
| l-rhamnose isomerase | CFA70_RS15400 | Not Available | Positive | 2994742 - 2996001 | 47214.0 |
| rhamnulose-1-phosphate aldolase | CFA70_RS15405 | Not Available | Positive | 2996145 - 2996969 | 29987.2 |
| lactaldehyde reductase | CFA70_RS15410 | Not Available | Positive | 2996981 - 2998129 | 40229.3 |
| l-rhamnose mutarotase | CFA70_RS15415 | Not Available | Positive | 2998126 - 2998440 | 12348.7 |
| helix-turn-helix domain-containing protein | CFA70_RS15420 | Not Available | Negative | 2998498 - 2999046 | 19754.8 |
| azlc family abc transporter permease | CFA70_RS15425 | Not Available | Positive | 2999148 - 2999807 | 22746.6 |
| azld domain-containing protein | CFA70_RS15430 | Not Available | Positive | 2999807 - 3000130 | 11257.3 |
| duf1471 domain-containing protein | CFA70_RS15435 | Not Available | Negative | 3000173 - 3000385 | 7345.75 |
| formate dehydrogenase accessory sulfurtransferase fdhd | CFA70_RS15440 | Not Available | Negative | 3000514 - 3001350 | 30502.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

