Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CFA70_RS14955 | Not Available | Negative | 2916248 - 2917156 | 33909.4 |
| carboxymuconolactone decarboxylase family protein | CFA70_RS14960 | Not Available | Positive | 2917246 - 2917623 | 13430.3 |
| bifunctional metallophosphatase/5'-nucleotidase | CFA70_RS14965 | Not Available | Negative | 2917662 - 2919218 | 56366.2 |
| cytoplasmic protein | CFA70_RS14970 | Not Available | Positive | 2919352 - 2920527 | 44771.3 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | CFA70_RS14975 | Not Available | Negative | 2920563 - 2922995 | 88712.7 |
| cystathionine gamma-synthase | CFA70_RS14980 | Not Available | Negative | 2922998 - 2924158 | 41494.6 |
| met regulon transcriptional regulator metj | CFA70_RS14985 | Not Available | Positive | 2924423 - 2924740 | 12208.5 |
| mfs transporter | CFA70_RS14990 | Not Available | Negative | 2924793 - 2926217 | 52045.3 |
| oligogalacturonate-specific porin kdgm family protein | CFA70_RS14995 | Not Available | Negative | 2926296 - 2926976 | 26867.9 |
| 50s ribosomal protein l31 | CFA70_RS15000 | Not Available | Negative | 2927315 - 2927527 | 7869.45 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

