Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 2882813 - 2882887 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2883002 - 2883086 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2883095 - 2883170 | Not Available |
| duf968 domain-containing protein | CFA70_RS29650 | Not Available | Positive | 2883190 - 2883258 | 2664.43 |
| type i pantothenate kinase | CFA70_RS14820 | Not Available | Positive | 2883561 - 2884511 | 36190.4 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | CFA70_RS14825 | Not Available | Negative | 2884544 - 2885506 | 35225.8 |
| udp-n-acetylmuramate dehydrogenase | CFA70_RS14830 | Not Available | Negative | 2885503 - 2886531 | 37841.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2886754 - 2886869 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2886966 - 2889873 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2890082 - 2890157 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

