Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccdb family protein | CFA70_RS14540 | Not Available | Negative | 2826972 - 2827289 | 11344.9 |
| type ii toxin-antitoxin system ccda family antitoxin | CFA70_RS14545 | Not Available | Negative | 2827289 - 2827582 | 11360.8 |
| hypothetical protein | CFA70_RS14550 | Not Available | Negative | 2827679 - 2828044 | 13159.5 |
| phage protein | CFA70_RS14555 | Not Available | Positive | 2828186 - 2828347 | 6309.6 |
| is30-like element iscfr4 family transposase | CFA70_RS14560 | Not Available | Positive | 2828443 - 2829603 | 44428.3 |
| addiction module antidote protein | CFA70_RS14565 | Not Available | Positive | 2829974 - 2830252 | 9775.89 |
| dipeptidase pepe | CFA70_RS14570 | Not Available | Positive | 2830361 - 2831050 | 24580.8 |
| na/pi cotransporter family protein | CFA70_RS14575 | Not Available | Negative | 2831116 - 2832747 | 59613.7 |
| methionine synthase | CFA70_RS14580 | Not Available | Negative | 2832941 - 2836624 | 135985.0 |
| glyoxylate bypass operon transcriptional repressor iclr | CFA70_RS14585 | Not Available | Positive | 2836820 - 2837644 | 29619.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

