Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3811 domain-containing protein | CFA70_RS14490 | Not Available | Positive | 2818773 - 2819045 | 10472.7 |
| 23s rrna pseudouridine(2604) synthase rluf | CFA70_RS14495 | Not Available | Negative | 2819042 - 2819923 | 32791.8 |
| sugar-binding transcriptional regulator | CFA70_RS14500 | Not Available | Positive | 2820393 - 2821346 | 35230.1 |
| sdr family oxidoreductase | CFA70_RS14505 | Not Available | Positive | 2821417 - 2822223 | 29025.6 |
| mannose/fructose/sorbose pts transporter subunit iia | CFA70_RS14510 | Not Available | Positive | 2822233 - 2822640 | 14621.6 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | CFA70_RS14515 | Not Available | Positive | 2822640 - 2823134 | 18472.3 |
| pts mannose/fructose/sorbose transporter subunit iic | CFA70_RS14520 | Not Available | Positive | 2823200 - 2823997 | 27993.0 |
| pts system mannose/fructose/sorbose family transporter subunit iid | CFA70_RS14525 | Not Available | Positive | 2824009 - 2824833 | 29467.9 |
| l-sorbose 1-phosphate reductase | CFA70_RS14530 | Not Available | Positive | 2824901 - 2826124 | 44805.2 |
| shikimate 5-dehydrogenase | CFA70_RS14535 | Not Available | Positive | 2826126 - 2826938 | 28753.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

