Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule biosynthesis gfcc family protein | CFA70_RS14435 | Not Available | Negative | 2808405 - 2809142 | 26572.7 |
| yjbf family lipoprotein | CFA70_RS14440 | Not Available | Negative | 2809139 - 2809777 | 23754.3 |
| exopolysaccharide production protein yjbe | CFA70_RS14445 | Not Available | Negative | 2809897 - 2810139 | 7400.49 |
| glucose-6-phosphate isomerase | CFA70_RS14450 | Not Available | Negative | 2810559 - 2812208 | 61317.8 |
| lysine-sensitive aspartokinase 3 | CFA70_RS14460 | Not Available | Positive | 2812523 - 2813872 | 48522.6 |
| nucleotidyltransferase domain-containing protein | CFA70_RS14465 | Not Available | Negative | 2813915 - 2814700 | 30260.3 |
| slipin family protein | CFA70_RS14470 | Not Available | Negative | 2814706 - 2815833 | 41996.1 |
| duf968 domain-containing protein | CFA70_RS14475 | Not Available | Positive | 2816283 - 2817869 | 59701.3 |
| helix-turn-helix domain-containing protein | CFA70_RS14480 | Not Available | Negative | 2817890 - 2818228 | 12546.3 |
| type ii toxin-antitoxin system rele/pare family toxin | CFA70_RS14485 | Not Available | Negative | 2818225 - 2818581 | 13946.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

