Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | CFA70_RS14330 | Not Available | Negative | 2783950 - 2784159 | 8296.62 |
| mate family efflux transporter dinf | CFA70_RS14335 | Not Available | Negative | 2784296 - 2785615 | 47818.3 |
| transcriptional repressor lexa | CFA70_RS14340 | Not Available | Negative | 2785747 - 2786355 | 22374.1 |
| diacylglycerol kinase | CFA70_RS14345 | Not Available | Negative | 2786465 - 2786833 | 13320.5 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | CFA70_RS14350 | Not Available | Positive | 2787005 - 2789425 | 91295.9 |
| 4-hydroxybenzoate octaprenyltransferase | CFA70_RS14355 | Not Available | Negative | 2789481 - 2790353 | 32506.7 |
| chorismate lyase | CFA70_RS14360 | Not Available | Negative | 2790367 - 2790864 | 18710.9 |
| type vi secretion system paar protein | CFA70_RS14365 | Not Available | Negative | 2791221 - 2791505 | 9504.23 |
| duf968 domain-containing protein | CFA70_RS14375 | Not Available | Negative | 2792070 - 2794873 | 101492.0 |
| maltose operon protein malm | CFA70_RS14380 | Not Available | Negative | 2795103 - 2796050 | 32732.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

