Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | CFA70_RS14280 | Not Available | Negative | 2774669 - 2775025 | 13473.0 |
| acid phosphatase apha | CFA70_RS14285 | Not Available | Negative | 2775153 - 2775866 | 26335.1 |
| aromatic amino acid transaminase | CFA70_RS14290 | Not Available | Negative | 2776114 - 2777307 | 43370.8 |
| alanine racemase | CFA70_RS14295 | Not Available | Negative | 2777436 - 2778515 | 39064.0 |
| replicative dna helicase | CFA70_RS14300 | Not Available | Negative | 2778532 - 2779947 | 52532.4 |
| quinone oxidoreductase | CFA70_RS14305 | Not Available | Positive | 2780012 - 2780995 | 34946.9 |
| envelope stress response protein pspg | CFA70_RS14310 | Not Available | Negative | 2781297 - 2781539 | 8922.79 |
| trna dihydrouridine(20/20a) synthase dusa | CFA70_RS14315 | Not Available | Negative | 2781673 - 2782671 | 37001.4 |
| cupin domain-containing protein | CFA70_RS14320 | Not Available | Negative | 2782779 - 2783267 | 18482.6 |
| zinc uptake transcriptional repressor zur | CFA70_RS14325 | Not Available | Positive | 2783383 - 2783901 | 19357.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

