Citrobacter freundii strain 18-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain 18-1 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. This strain is notable for its presence in diverse habitats, including hospital sewage, intestinal tracts, sewage systems, soil, and surface waters. It possesses true flagella, which facilitate mobility in various environments. This strain has been identified in a wide range of hosts, including Homo sapiens, various Metazoa, and multiple animal species such as Oryctolagus cuniculus (domestic rabbit), Canis lupus familiaris (domestic dog), and Felis catus (domestic cat). It is also found in aquatic species like Tilapia and Cyprinus carpio, as well as in amphibians and birds, indicating a broad ecological distribution. Citrobacter freundii strain 18-1 is recognized for its potential to cause opportunistic infections. In humans, it has been linked to urinary and respiratory tract infections, as well as infections associated with wounds. In animals, the strain similarly causes respiratory tract infections in dogs, pleuritis and urinary tract infections in cats, and respiratory infections in horses. These health effects highlight the bacterium's role as a pathogen in both humans and animals. The strain is nonsporulating and contains four replicons, which may contribute to its adaptability in various environments. The presence of Citrobacter freundii in diverse ecological niches, coupled with its opportunistic pathogenicity, underscores its significance in both clinical and environmental microbiology. Understanding its distribution and pathogenic potential can aid in managing infections and assessing ecological impacts in both human health and animal care.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
Strainstrain 18-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii strain 18-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain 18-1 plasmid pA18-1, complete

Gene Summary

Adenine Count

38861 bp

Thymine Count

39496 bp

Guanine Count

39710 bp

Cytosine Count

41588 bp

Genome Length

159655 bp

Protein-coding Genes

174 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mmcq/yjbr family dna-binding proteinCFA70_RS14280Not AvailableNegative2774669 - 277502513473.0
acid phosphatase aphaCFA70_RS14285Not AvailableNegative2775153 - 277586626335.1
aromatic amino acid transaminaseCFA70_RS14290Not AvailableNegative2776114 - 277730743370.8
alanine racemaseCFA70_RS14295Not AvailableNegative2777436 - 277851539064.0
replicative dna helicaseCFA70_RS14300Not AvailableNegative2778532 - 277994752532.4
quinone oxidoreductaseCFA70_RS14305Not AvailablePositive2780012 - 278099534946.9
envelope stress response protein pspgCFA70_RS14310Not AvailableNegative2781297 - 27815398922.79
trna dihydrouridine(20/20a) synthase dusaCFA70_RS14315Not AvailableNegative2781673 - 278267137001.4
cupin domain-containing proteinCFA70_RS14320Not AvailableNegative2782779 - 278326718482.6
zinc uptake transcriptional repressor zurCFA70_RS14325Not AvailablePositive2783383 - 278390119357.4

Displaying genes 3271 – 3280 of 5574 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total