Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110-like element is5075 family transposase | CFA70_RS14150 | Not Available | Negative | 2750803 - 2751807 | 37527.7 |
| duf968 domain-containing protein | CFA70_RS14155 | Not Available | Negative | 2751878 - 2753272 | 51282.3 |
| cytochrome c nitrite reductase subunit nrfd | CFA70_RS14160 | Not Available | Negative | 2753281 - 2754237 | 35189.5 |
| cytochrome c nitrite reductase fe-s protein | CFA70_RS14165 | Not Available | Negative | 2754234 - 2754905 | 24431.4 |
| cytochrome c nitrite reductase pentaheme subunit | CFA70_RS14170 | Not Available | Negative | 2754902 - 2755468 | 20889.8 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | CFA70_RS14175 | Not Available | Negative | 2755513 - 2756949 | 53698.8 |
| acetate--coa ligase | CFA70_RS14190 | Not Available | Positive | 2757383 - 2759341 | 72079.4 |
| duf485 domain-containing protein | CFA70_RS14200 | Not Available | Positive | 2759578 - 2759892 | 11689.5 |
| cation/acetate symporter actp | CFA70_RS14205 | Not Available | Positive | 2759889 - 2761538 | 59205.6 |
| lrgb family protein | CFA70_RS14210 | Not Available | Negative | 2761584 - 2762273 | 24775.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

