Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnp | CFA70_RS14040 | Not Available | Positive | 2726105 - 2726863 | 28071.8 |
| ddrrrql repeat protein yjdp | CFA70_RS14045 | Not Available | Negative | 2727065 - 2727394 | 13451.3 |
| hybrid sensor histidine kinase/response regulator | CFA70_RS14050 | Not Available | Negative | 2727464 - 2729728 | 82962.0 |
| sugar abc transporter atp-binding protein | CFA70_RS14060 | Not Available | Positive | 2729843 - 2731366 | 55639.0 |
| abc transporter permease subunit | CFA70_RS14065 | Not Available | Positive | 2731359 - 2732354 | 34640.6 |
| abc transporter substrate-binding protein | CFA70_RS14070 | Not Available | Positive | 2732443 - 2733384 | 32787.6 |
| d-lyxose/d-mannose family sugar isomerase | CFA70_RS14075 | Not Available | Positive | 2733505 - 2734188 | 25772.2 |
| ketose 1,6-bisphosphate aldolase | CFA70_RS14080 | Not Available | Positive | 2734203 - 2735063 | 31323.4 |
| carbohydrate kinase family protein | CFA70_RS14085 | Not Available | Positive | 2735060 - 2736064 | 36791.2 |
| response regulator transcription factor | CFA70_RS14090 | Not Available | Negative | 2736152 - 2736883 | 26812.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

