Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism transcriptional regulator phnf | CFA70_RS13990 | Not Available | Positive | 2718796 - 2719521 | 27702.1 |
| phosphonate c-p lyase system protein phng | CFA70_RS13995 | Not Available | Positive | 2719522 - 2719974 | 16805.1 |
| phosphonate c-p lyase system protein phnh | CFA70_RS14000 | Not Available | Positive | 2719971 - 2720555 | 20937.4 |
| carbon-phosphorus lyase complex subunit phni | CFA70_RS14005 | Not Available | Positive | 2720555 - 2721622 | 38967.1 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | CFA70_RS14010 | Not Available | Positive | 2721669 - 2722460 | 29786.7 |
| phosphonate c-p lyase system protein phnk | CFA70_RS14015 | Not Available | Positive | 2722457 - 2723215 | 27756.5 |
| phosphonate c-p lyase system protein phnl | CFA70_RS14020 | Not Available | Positive | 2723305 - 2723985 | 24939.2 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | CFA70_RS14025 | Not Available | Positive | 2723982 - 2725118 | 41921.7 |
| ribose 1,5-bisphosphokinase | CFA70_RS14030 | Not Available | Positive | 2725121 - 2725675 | 20312.5 |
| aminoalkylphosphonate n-acetyltransferase | CFA70_RS14035 | Not Available | Positive | 2725662 - 2726096 | 16223.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

