Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxt activity modulator pmrr | CFA70_RS13935 | Not Available | Negative | 2707609 - 2707698 | 3390.18 |
| glycine betaine/l-proline transporter prop | CFA70_RS13940 | Not Available | Negative | 2707856 - 2709358 | 54929.3 |
| 2-keto-3-deoxygluconate transporter | CFA70_RS13945 | Not Available | Positive | 2710058 - 2711056 | 34042.4 |
| diguanylate cyclase regulator rdcb family protein | CFA70_RS13950 | Not Available | Negative | 2711087 - 2711980 | 33316.2 |
| clamp-binding protein crfc | CFA70_RS13955 | Not Available | Negative | 2711977 - 2714334 | 88799.3 |
| zinc ribbon domain-containing protein yjdm | CFA70_RS13960 | Not Available | Positive | 2714874 - 2715209 | 12261.5 |
| voc family metalloprotein yjdn | CFA70_RS13965 | Not Available | Positive | 2715349 - 2715798 | 16436.2 |
| phosphonate abc transporter atp-binding protein | CFA70_RS13970 | Not Available | Positive | 2715931 - 2716719 | 29295.2 |
| phosphonate abc transporter substrate-binding protein | CFA70_RS13980 | Not Available | Positive | 2716875 - 2717891 | 37300.4 |
| phosphonate abc transporter, permease protein phne | CFA70_RS13985 | Not Available | Positive | 2717996 - 2718775 | 28482.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

