Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| semisweet transporter | CFA70_RS13885 | Not Available | Negative | 2694695 - 2694949 | 9471.96 |
| melibiose:sodium transporter melb | CFA70_RS13890 | Not Available | Negative | 2694952 - 2696382 | 52727.4 |
| alpha-galactosidase | CFA70_RS13895 | Not Available | Negative | 2696475 - 2697830 | 50608.8 |
| transcriptional regulator melr | CFA70_RS13900 | Not Available | Positive | 2698100 - 2699032 | 35633.7 |
| arginine decarboxylase | CFA70_RS13905 | Not Available | Positive | 2699270 - 2701537 | 83949.1 |
| arac family transcriptional regulator | CFA70_RS13910 | Not Available | Positive | 2701849 - 2702610 | 28840.1 |
| arginine/agmatine antiporter | CFA70_RS13915 | Not Available | Positive | 2702738 - 2704075 | 47032.6 |
| phosphoethanolamine transferase epta | CFA70_RS13920 | Not Available | Positive | 2704222 - 2705859 | 61099.0 |
| two-component system response regulator pmra | CFA70_RS13925 | Not Available | Positive | 2705864 - 2706532 | 25036.2 |
| two-component system sensor histidine kinase pmrb | CFA70_RS13930 | Not Available | Positive | 2706533 - 2707615 | 40565.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

