Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | CFA70_RS13830 | Not Available | Negative | 2680097 - 2681818 | 61809.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2682117 - 2682232 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2682329 - 2685235 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2685455 - 2685530 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2685616 - 2687157 | Not Available |
| sensor histidine kinase | CFA70_RS13860 | Not Available | Positive | 2687756 - 2689387 | 60437.2 |
| two-component system response regulator dcur | CFA70_RS13865 | Not Available | Positive | 2689384 - 2690103 | 27611.0 |
| anaerobic c4-dicarboxylate transporter dcub | CFA70_RS13870 | Not Available | Positive | 2690820 - 2692160 | 47982.3 |
| class i fumarate hydratase fuma | CFA70_RS13875 | Not Available | Positive | 2692257 - 2693903 | 59879.4 |
| duf2238 domain-containing protein | CFA70_RS13880 | Not Available | Positive | 2694051 - 2694674 | 23025.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

