Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein | CFA70_RS13785 | Not Available | Positive | 2673738 - 2674211 | 17578.6 |
| radc family protein | CFA70_RS13790 | Not Available | Positive | 2674224 - 2674703 | 17823.4 |
| duf987 domain-containing protein | CFA70_RS13795 | Not Available | Positive | 2674717 - 2674938 | 8491.29 |
| type iv toxin-antitoxin system yeeu family antitoxin | CFA70_RS13800 | Not Available | Positive | 2674960 - 2675325 | 13418.0 |
| ta system toxin cbta family protein | CFA70_RS13805 | Not Available | Positive | 2675383 - 2675763 | 14183.2 |
| duf5983 family protein | CFA70_RS13810 | Not Available | Positive | 2675760 - 2676251 | 18140.9 |
| duf957 domain-containing protein | CFA70_RS29635 | Not Available | Positive | 2676325 - 2676492 | 6278.38 |
| duf4942 domain-containing protein | CFA70_RS13820 | Not Available | Positive | 2676573 - 2677421 | 32356.0 |
| hypothetical protein | CFA70_RS29640 | Not Available | Positive | 2677997 - 2678152 | 5284.25 |
| fatty acid--coa ligase | CFA70_RS13825 | Not Available | Positive | 2678216 - 2679877 | 61364.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

