Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | CFA70_RS13690 | Not Available | Negative | 2657603 - 2658253 | 23257.2 |
| fimbrial protein | CFA70_RS13695 | Not Available | Negative | 2658268 - 2659251 | 34164.0 |
| fimbria/pilus outer membrane usher protein | CFA70_RS13700 | Not Available | Negative | 2659242 - 2661728 | 91138.1 |
| molecular chaperone | CFA70_RS13705 | Not Available | Negative | 2661740 - 2662441 | 25295.2 |
| hypothetical protein | CFA70_RS29350 | Not Available | Negative | 2662537 - 2662716 | 6637.23 |
| is30 family transposase | CFA70_RS13710 | Not Available | Positive | 2662657 - 2663604 | 35828.8 |
| duf968 domain-containing protein | CFA70_RS13715 | Not Available | Negative | 2663639 - 2664238 | 20539.0 |
| duf968 domain-containing protein | CFA70_RS13720 | Not Available | Positive | 2664654 - 2665601 | 35386.9 |
| duf968 domain-containing protein | CFA70_RS13725 | Not Available | Negative | 2665827 - 2665943 | 4428.35 |
| duf968 domain-containing protein | CFA70_RS29625 | Not Available | Positive | 2665959 - 2666216 | 9706.89 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

