Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent cation tolerance protein cuta | CFA70_RS13635 | Not Available | Positive | 2648840 - 2649187 | 12828.4 |
| protein-disulfide reductase dsbd | CFA70_RS13640 | Not Available | Positive | 2649163 - 2650872 | 61820.7 |
| duf968 domain-containing protein | CFA70_RS13645 | Not Available | Positive | 2650909 - 2651486 | 21566.6 |
| Trna-phe | Not Available | Not Available | Positive | 2651639 - 2651714 | Not Available |
| tyrosine-type recombinase/integrase | CFA70_RS13655 | Not Available | Positive | 2651910 - 2653175 | 48408.3 |
| is1-like element is1b family transposase | CFA70_RS13660 | Not Available | Negative | 2653169 - 2653866 | 26558.3 |
| duf968 domain-containing protein | CFA70_RS13670 | Not Available | Positive | 2653916 - 2655050 | 40941.0 |
| flagellar brake protein | CFA70_RS13675 | Not Available | Positive | 2655269 - 2655979 | 27653.3 |
| helix-turn-helix transcriptional regulator | CFA70_RS13680 | Not Available | Positive | 2656099 - 2656683 | 22046.3 |
| eal domain-containing protein | CFA70_RS13685 | Not Available | Positive | 2656825 - 2657541 | 27575.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

