Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | CFA70_RS13580 | Not Available | Negative | 2638117 - 2638683 | 20521.3 |
| ef-p beta-lysylation protein epmb | CFA70_RS13585 | Not Available | Positive | 2638725 - 2639753 | 38615.6 |
| yjej family protein | CFA70_RS13590 | Not Available | Positive | 2639938 - 2640801 | 32714.4 |
| duf4156 domain-containing protein | CFA70_RS13600 | Not Available | Negative | 2640981 - 2641334 | 11970.2 |
| chaperonin groel | CFA70_RS13605 | Not Available | Negative | 2641469 - 2643115 | 57247.3 |
| co-chaperone groes | CFA70_RS13610 | Not Available | Negative | 2643159 - 2643452 | 10318.5 |
| l-methionine/branched-chain amino acid transporter | CFA70_RS13615 | Not Available | Positive | 2643728 - 2644993 | 45148.6 |
| fxsa family protein | CFA70_RS13620 | Not Available | Negative | 2645043 - 2645519 | 17667.2 |
| aspartate ammonia-lyase | CFA70_RS13625 | Not Available | Positive | 2645858 - 2647294 | 52190.0 |
| anaerobic c4-dicarboxylate transporter dcua | CFA70_RS13630 | Not Available | Positive | 2647410 - 2648711 | 45713.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

