Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit frdd | CFA70_RS13535 | Not Available | Positive | 2632234 - 2632590 | 13046.6 |
| lysr family transcriptional regulator ampr | CFA70_RS13540 | Not Available | Negative | 2632633 - 2633508 | 32495.2 |
| cmy-2 family class c beta-lactamase | CFA70_RS13545 | Not Available | Positive | 2633640 - 2634785 | 41945.5 |
| lipocalin family protein | CFA70_RS13550 | Not Available | Positive | 2634877 - 2635410 | 19921.9 |
| duf968 domain-containing protein | CFA70_RS29615 | Not Available | Negative | 2635407 - 2635487 | 2689.38 |
| is5-like element isec35 family transposase | CFA70_RS13555 | Not Available | Positive | 2635547 - 2636464 | 34376.9 |
| quaternary ammonium compound efflux smr transporter suge | CFA70_RS13560 | Not Available | Negative | 2636461 - 2636784 | 11200.2 |
| helix-turn-helix transcriptional regulator | CFA70_RS13565 | Not Available | Positive | 2637041 - 2637640 | 21981.9 |
| lipoprotein toxin entericidin b | CFA70_RS13570 | Not Available | Negative | 2637671 - 2637817 | 4781.8 |
| lipoprotein antitoxin entericidin a | CFA70_RS13575 | Not Available | Negative | 2637925 - 2638059 | 4719.94 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

