Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | CFA70_RS13280 | Not Available | Negative | 2584920 - 2585540 | 22246.4 |
| lysm-like peptidoglycan-binding domain-containing protein | CFA70_RS13285 | Not Available | Positive | 2585760 - 2586410 | 23626.0 |
| dmt family transporter | CFA70_RS13290 | Not Available | Negative | 2586440 - 2587363 | 33123.1 |
| 50s ribosomal protein l9 | CFA70_RS13295 | Not Available | Negative | 2587506 - 2587955 | 15774.9 |
| 30s ribosomal protein s18 | CFA70_RS13300 | Not Available | Negative | 2587997 - 2588224 | 8986.94 |
| primosomal replication protein n | CFA70_RS13305 | Not Available | Negative | 2588229 - 2588543 | 11329.7 |
| 30s ribosomal protein s6 | CFA70_RS13310 | Not Available | Negative | 2588550 - 2588945 | 15160.8 |
| tsup family transporter | CFA70_RS13320 | Not Available | Negative | 2589104 - 2589868 | 27439.5 |
| duf1471 family protein yjfy | CFA70_RS13325 | Not Available | Positive | 2590167 - 2590442 | 9972.71 |
| l-ribulose-5-phosphate 4-epimerase | CFA70_RS13330 | Not Available | Negative | 2590575 - 2591261 | 25350.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

