Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytfj family protein | CFA70_RS13230 | Not Available | Positive | 2573809 - 2574366 | 20580.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CFA70_RS13235 | Not Available | Negative | 2574356 - 2575096 | 27226.6 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | CFA70_RS13240 | Not Available | Positive | 2575285 - 2577228 | 70700.9 |
| winged helix-turn-helix transcriptional regulator | CFA70_RS13245 | Not Available | Negative | 2577326 - 2577706 | 14114.0 |
| sdr family oxidoreductase | CFA70_RS13250 | Not Available | Positive | 2577797 - 2578645 | 29167.5 |
| arac family transcriptional regulator | CFA70_RS13255 | Not Available | Positive | 2578727 - 2579551 | 31765.9 |
| dmt family transporter | CFA70_RS13260 | Not Available | Positive | 2579628 - 2580593 | 35026.3 |
| methyl-accepting chemotaxis protein | CFA70_RS13265 | Not Available | Negative | 2580657 - 2582210 | 55360.8 |
| iron-sulfur cluster repair protein ytfe | CFA70_RS13270 | Not Available | Positive | 2582456 - 2583118 | 24930.2 |
| d-serine/d-alanine/glycine transporter | CFA70_RS13275 | Not Available | Negative | 2583202 - 2584611 | 51606.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

