Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | CFA70_RS13180 | Not Available | Positive | 2564508 - 2565692 | 43256.4 |
| duf968 domain-containing protein | CFA70_RS13185 | Not Available | Positive | 2565689 - 2566755 | 39254.8 |
| gfo/idh/moca family protein | CFA70_RS13190 | Not Available | Positive | 2566767 - 2567789 | 37617.9 |
| duf968 domain-containing protein | CFA70_RS13195 | Not Available | Positive | 2567871 - 2568554 | 25760.6 |
| is30 family transposase | CFA70_RS13200 | Not Available | Negative | 2568590 - 2569537 | 35828.8 |
| hypothetical protein | CFA70_RS29345 | Not Available | Positive | 2569478 - 2569660 | 6686.36 |
| duf968 domain-containing protein | CFA70_RS13205 | Not Available | Positive | 2569642 - 2570505 | 32256.5 |
| 1,4-beta-xylanase | CFA70_RS13210 | Not Available | Positive | 2570516 - 2571586 | 41121.4 |
| hemolysin family protein | CFA70_RS13215 | Not Available | Positive | 2571867 - 2573207 | 49738.6 |
| duf1107 domain-containing protein | CFA70_RS13220 | Not Available | Negative | 2573274 - 2573480 | 8088.21 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

