Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFA70_RS13130 | Not Available | Negative | 2552280 - 2552561 | 10707.9 |
| hypothetical protein | CFA70_RS29610 | Not Available | Negative | 2552562 - 2553023 | 17791.2 |
| is630-like element isec33 family transposase | CFA70_RS13140 | Not Available | Positive | 2552910 - 2553941 | 39607.2 |
| duf968 domain-containing protein | CFA70_RS13145 | Not Available | Negative | 2554254 - 2554928 | 24974.8 |
| gamma-glutamylcyclotransferase | CFA70_RS13150 | Not Available | Negative | 2555379 - 2555723 | 12950.3 |
| autotransporter assembly complex protein tamb | CFA70_RS13155 | Not Available | Negative | 2555726 - 2559502 | 136199.0 |
| autotransporter assembly complex protein tama | CFA70_RS13160 | Not Available | Negative | 2559499 - 2561232 | 64744.6 |
| peptide-methionine (s)-s-oxide reductase msra | CFA70_RS13165 | Not Available | Positive | 2561445 - 2562083 | 23466.4 |
| laci family dna-binding transcriptional regulator | CFA70_RS13170 | Not Available | Negative | 2562091 - 2563146 | 38805.8 |
| gfo/idh/moca family protein | CFA70_RS13175 | Not Available | Positive | 2563337 - 2564491 | 43347.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

