Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | CFA70_RS13075 | Not Available | Negative | 2540795 - 2542147 | 48439.5 |
| ribosome biogenesis factor yjga | CFA70_RS13080 | Not Available | Positive | 2542243 - 2542794 | 21371.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | CFA70_RS13085 | Not Available | Negative | 2542902 - 2544281 | 50072.2 |
| class 1 fructose-bisphosphatase | CFA70_RS13095 | Not Available | Positive | 2544457 - 2545455 | 36685.8 |
| methyl-accepting chemotaxis protein | CFA70_RS13100 | Not Available | Negative | 2545570 - 2546682 | 39864.7 |
| galactofuranose abc transporter, permease protein yjff | CFA70_RS13105 | Not Available | Negative | 2546786 - 2547787 | 35139.1 |
| galactofuranose abc transporter, atp-binding protein ytft | CFA70_RS13110 | Not Available | Negative | 2547774 - 2548796 | 35498.0 |
| galactofuranose abc transporter, atp-binding protein ytfr | CFA70_RS13115 | Not Available | Negative | 2548810 - 2550312 | 55165.4 |
| galactofuranose abc transporter substrate-binding protein ytfq | CFA70_RS13120 | Not Available | Negative | 2550416 - 2551372 | 34258.5 |
| inorganic diphosphatase | CFA70_RS13125 | Not Available | Positive | 2551682 - 2552209 | 19539.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

