Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bglg family transcription antiterminator | CFA70_RS13025 | Not Available | Negative | 2532625 - 2534538 | 72859.9 |
| 2-dehydro-3-deoxy-phosphogluconate aldolase | CFA70_RS13030 | Not Available | Negative | 2534560 - 2535300 | 26204.5 |
| dgae family pyridoxal phosphate-dependent ammonia lyase | CFA70_RS13035 | Not Available | Negative | 2535297 - 2536415 | 39958.2 |
| amidohydrolase/deacetylase family metallohydrolase | CFA70_RS13040 | Not Available | Negative | 2536399 - 2537532 | 40429.5 |
| duf4310 family protein | CFA70_RS13045 | Not Available | Negative | 2537591 - 2538235 | 21932.3 |
| duf4311 domain-containing protein | CFA70_RS13050 | Not Available | Negative | 2538247 - 2539023 | 27283.9 |
| duf4312 family protein | CFA70_RS13055 | Not Available | Negative | 2539046 - 2539345 | 11329.8 |
| sfcgs family glycine-rich protein | CFA70_RS13060 | Not Available | Negative | 2539348 - 2539710 | 12457.1 |
| glycine dehydrogenase | CFA70_RS13065 | Not Available | Negative | 2539721 - 2540029 | 11381.5 |
| cytochrome b562 | CFA70_RS13070 | Not Available | Negative | 2540362 - 2540748 | 13986.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

