Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | CFA70_RS12975 | Not Available | Negative | 2519659 - 2520168 | 18635.3 |
| trap transporter substrate-binding protein | CFA70_RS12980 | Not Available | Negative | 2520231 - 2521208 | 36287.0 |
| magnesium-translocating p-type atpase | CFA70_RS12985 | Not Available | Negative | 2521587 - 2524295 | 99921.0 |
| trehalose operon repressor trer | CFA70_RS12990 | Not Available | Positive | 2524685 - 2525632 | 34922.1 |
| pts trehalose transporter subunit iibc | CFA70_RS12995 | Not Available | Positive | 2525789 - 2527207 | 51097.0 |
| alpha,alpha-phosphotrehalase | CFA70_RS13000 | Not Available | Positive | 2527257 - 2528909 | 63297.9 |
| anaerobic ribonucleoside-triphosphate reductase | CFA70_RS13005 | Not Available | Positive | 2529318 - 2531456 | 80110.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | CFA70_RS13010 | Not Available | Positive | 2531563 - 2532027 | 17401.9 |
| type ii toxin-antitoxin system rele family toxin | CFA70_RS13015 | Not Available | Negative | 2532031 - 2532315 | 10841.2 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | CFA70_RS13020 | Not Available | Negative | 2532305 - 2532547 | 8961.86 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

