Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | CFA70_RS12925 | Not Available | Positive | 2511940 - 2512872 | 33165.0 |
| ornithine carbamoyltransferase | CFA70_RS12930 | Not Available | Positive | 2512930 - 2513934 | 37240.7 |
| yfcc family protein | CFA70_RS12935 | Not Available | Positive | 2513990 - 2515393 | 49974.7 |
| arginine repressor | CFA70_RS12940 | Not Available | Positive | 2515538 - 2516017 | 17843.7 |
| hypothetical protein | CFA70_RS12945 | Not Available | Negative | 2516014 - 2516136 | 4840.8 |
| pyr operon leader peptide | CFA70_RS12950 | Not Available | Positive | 2516116 - 2516217 | 3911.89 |
| aspartate carbamoyltransferase | CFA70_RS12955 | Not Available | Positive | 2516254 - 2517189 | 34365.2 |
| aspartate carbamoyltransferase regulatory subunit | CFA70_RS12960 | Not Available | Positive | 2517203 - 2517664 | 17159.6 |
| 2-iminobutanoate/2-iminopropanoate deaminase | CFA70_RS12965 | Not Available | Positive | 2517864 - 2518250 | 13576.2 |
| trap transporter large permease | CFA70_RS12970 | Not Available | Negative | 2518342 - 2519628 | 45966.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

