Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | CFA70_RS12870 | Not Available | Positive | 2500385 - 2501896 | 54876.0 |
| dna polymerase iii subunit chi | CFA70_RS12875 | Not Available | Positive | 2502033 - 2502476 | 16533.5 |
| valine--trna ligase | CFA70_RS12880 | Not Available | Positive | 2502476 - 2505331 | 108013.0 |
| gnat family n-acetyltransferase | CFA70_RS12885 | Not Available | Positive | 2505551 - 2506054 | 18116.7 |
| hypothetical protein | CFA70_RS12890 | Not Available | Negative | 2506081 - 2506911 | 30670.8 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | CFA70_RS12895 | Not Available | Negative | 2507075 - 2507833 | 28919.8 |
| ribonuclease e inhibitor rrab | CFA70_RS12900 | Not Available | Negative | 2507885 - 2508310 | 15962.8 |
| ornithine carbamoyltransferase | CFA70_RS12905 | Not Available | Positive | 2508474 - 2509478 | 36771.1 |
| yhch/yjgk/yial family protein | CFA70_RS12910 | Not Available | Negative | 2509585 - 2510037 | 16781.1 |
| arginine deiminase | CFA70_RS12920 | Not Available | Positive | 2510710 - 2511930 | 45803.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

