Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630-like element isec33 family transposase | CFA70_RS12820 | Not Available | Positive | 2490536 - 2491567 | 39607.2 |
| aaa family atpase | CFA70_RS12825 | Not Available | Positive | 2491548 - 2492438 | 34284.1 |
| duf4435 domain-containing protein | CFA70_RS12830 | Not Available | Positive | 2492431 - 2493282 | 32168.9 |
| tyrosine-type recombinase/integrase | CFA70_RS12835 | Not Available | Negative | 2493405 - 2494661 | 47556.3 |
| Trna-leu | Not Available | Not Available | Positive | 2494860 - 2494944 | Not Available |
| nadph-dependent aldehyde reductase ahr | CFA70_RS12845 | Not Available | Positive | 2495165 - 2496184 | 36358.8 |
| helicase hera-like c-terminal domain-containing protein | CFA70_RS12850 | Not Available | Positive | 2496332 - 2497834 | 54214.2 |
| lps export abc transporter permease lptg | CFA70_RS12855 | Not Available | Negative | 2497936 - 2499018 | 39545.9 |
| lps export abc transporter permease lptf | CFA70_RS12860 | Not Available | Negative | 2499018 - 2500118 | 40379.4 |
| hypothetical protein | CFA70_RS29605 | Not Available | Negative | 2500181 - 2500231 | 1781.23 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

