Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | CFA70_RS12705 | Not Available | Negative | 2468293 - 2469525 | 43077.4 |
| lysr family transcriptional regulator | CFA70_RS12710 | Not Available | Positive | 2469745 - 2470671 | 34613.6 |
| duf445 domain-containing protein | CFA70_RS12715 | Not Available | Positive | 2470747 - 2472027 | 48008.3 |
| duf968 domain-containing protein | CFA70_RS12720 | Not Available | Positive | 2472041 - 2472489 | 17122.6 |
| mfs transporter | CFA70_RS12725 | Not Available | Positive | 2472587 - 2473774 | 41795.7 |
| hypothetical protein | CFA70_RS12730 | Not Available | Positive | 2473965 - 2474183 | 8226.44 |
| porin | CFA70_RS12735 | Not Available | Negative | 2474230 - 2475207 | 35377.1 |
| hypothetical protein | CFA70_RS12740 | Not Available | Negative | 2475328 - 2475531 | 7824.38 |
| uxu operon transcriptional regulator | CFA70_RS12745 | Not Available | Negative | 2476180 - 2476953 | 29554.0 |
| fructuronate reductase | CFA70_RS12750 | Not Available | Negative | 2477086 - 2478561 | 54054.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

