Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2955 domain-containing protein | CFA70_RS12655 | Not Available | Negative | 2458791 - 2459855 | 39387.5 |
| hlyd family secretion protein | CFA70_RS12660 | Not Available | Negative | 2459845 - 2460912 | 39673.1 |
| marr family winged helix-turn-helix transcriptional regulator | CFA70_RS12665 | Not Available | Negative | 2460919 - 2461383 | 17720.4 |
| duf1127 domain-containing protein | CFA70_RS12670 | Not Available | Negative | 2461530 - 2461694 | 6688.15 |
| plp-dependent aminotransferase family protein | CFA70_RS12675 | Not Available | Positive | 2461872 - 2463284 | 52620.2 |
| duf968 domain-containing protein | CFA70_RS12680 | Not Available | Negative | 2463336 - 2463725 | 14357.2 |
| arac family transcriptional regulator | CFA70_RS12685 | Not Available | Positive | 2463911 - 2464726 | 31231.0 |
| lyse family translocator | CFA70_RS12690 | Not Available | Positive | 2464775 - 2465425 | 23389.0 |
| multidrug efflux mfs transporter mdtm | CFA70_RS12695 | Not Available | Positive | 2465750 - 2466991 | 44846.2 |
| cystathionine beta-lyase | CFA70_RS12700 | Not Available | Negative | 2467072 - 2468262 | 43498.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

