Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein dnat | CFA70_RS12555 | Not Available | Positive | 2434663 - 2435202 | 19477.1 |
| dna replication protein dnac | CFA70_RS12560 | Not Available | Positive | 2435205 - 2435942 | 28069.9 |
| duf2501 domain-containing protein | CFA70_RS12565 | Not Available | Positive | 2436013 - 2436504 | 17151.3 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | CFA70_RS12570 | Not Available | Positive | 2436736 - 2439027 | 85254.3 |
| tagaturonate reductase | CFA70_RS12575 | Not Available | Negative | 2439071 - 2440516 | 54154.6 |
| zinc-binding alcohol dehydrogenase family protein | CFA70_RS12580 | Not Available | Negative | 2440530 - 2441552 | 36446.0 |
| gntr family transcriptional regulator | CFA70_RS12585 | Not Available | Positive | 2441689 - 2442603 | 35156.0 |
| mfs transporter | CFA70_RS12590 | Not Available | Positive | 2442817 - 2444178 | 49484.5 |
| gnat family n-acetyltransferase | CFA70_RS12595 | Not Available | Positive | 2444231 - 2444746 | 19174.0 |
| methyl-accepting chemotaxis protein | CFA70_RS12600 | Not Available | Negative | 2444832 - 2446493 | 60023.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

