Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2426627 - 2426711 | Not Available |
| duf1435 domain-containing protein | CFA70_RS12510 | Not Available | Negative | 2426752 - 2426988 | 8615.19 |
| diguanylate cyclase | CFA70_RS12515 | Not Available | Positive | 2427244 - 2428320 | 40370.8 |
| siderophore-iron reductase fhuf | CFA70_RS12520 | Not Available | Positive | 2428429 - 2429217 | 29968.4 |
| pts sugar transporter subunit iic | CFA70_RS12525 | Not Available | Negative | 2429247 - 2430590 | 49268.8 |
| ybak/ebsc family protein | CFA70_RS12530 | Not Available | Positive | 2430957 - 2431415 | 16234.6 |
| dna-binding transcriptional activator bglj | CFA70_RS12535 | Not Available | Negative | 2431473 - 2432150 | 24820.2 |
| helix-turn-helix transcriptional regulator | CFA70_RS12540 | Not Available | Negative | 2432111 - 2432836 | 27100.9 |
| threonine/serine thre exporter family protein | CFA70_RS12545 | Not Available | Positive | 2433299 - 2434075 | 28085.9 |
| threonine/serine exporter | CFA70_RS12550 | Not Available | Positive | 2434066 - 2434539 | 17120.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

