Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | CFA70_RS12455 | Not Available | Negative | 2419423 - 2420496 | 39424.6 |
| duf1328 domain-containing protein | CFA70_RS12460 | Not Available | Negative | 2420618 - 2420779 | 5506.17 |
| molecular chaperone osmy | CFA70_RS12465 | Not Available | Negative | 2420907 - 2421524 | 21394.2 |
| peptide chain release factor 3 | CFA70_RS12470 | Not Available | Negative | 2421833 - 2423422 | 59762.9 |
| pyrimidine 5'-nucleotidase | CFA70_RS12475 | Not Available | Negative | 2423514 - 2424194 | 25483.2 |
| ribosomal protein s18-alanine n-acetyltransferase | CFA70_RS12480 | Not Available | Negative | 2424209 - 2424655 | 16709.9 |
| dna polymerase iii subunit psi | CFA70_RS12485 | Not Available | Negative | 2424624 - 2425037 | 15384.5 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | CFA70_RS12490 | Not Available | Positive | 2425141 - 2426172 | 37730.9 |
| Trna-leu | Not Available | Not Available | Positive | 2426396 - 2426481 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2426510 - 2426594 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

