Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | CFA70_RS12300 | Not Available | Positive | 2387178 - 2387951 | 29218.0 |
| threonine synthase | CFA70_RS12305 | Not Available | Negative | 2388036 - 2389322 | 47056.4 |
| homoserine kinase | CFA70_RS12310 | Not Available | Negative | 2389326 - 2390255 | 33241.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | CFA70_RS12315 | Not Available | Negative | 2390257 - 2392719 | 88782.1 |
| thr operon leader peptide | CFA70_RS12320 | Not Available | Negative | 2392799 - 2392864 | 2150.67 |
| trna/rrna methyltransferase | CFA70_RS12325 | Not Available | Negative | 2393076 - 2393762 | 25559.9 |
| protein yjjy | CFA70_RS12330 | Not Available | Negative | 2394161 - 2394301 | 4857.09 |
| two-component system response regulator arca | CFA70_RS12335 | Not Available | Positive | 2394397 - 2395113 | 27292.7 |
| cell envelope integrity protein cred | CFA70_RS12340 | Not Available | Negative | 2395174 - 2396535 | 50076.9 |
| two-component system sensor histidine kinase crec | CFA70_RS12345 | Not Available | Negative | 2396593 - 2398017 | 52074.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

