Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | CFA70_RS12250 | Not Available | Negative | 2375514 - 2376680 | 41316.4 |
| molecular chaperone dnaj | CFA70_RS12255 | Not Available | Negative | 2376887 - 2378020 | 41042.7 |
| molecular chaperone dnak | CFA70_RS12260 | Not Available | Negative | 2378106 - 2380028 | 69305.0 |
| duf2541 family protein | CFA70_RS12265 | Not Available | Positive | 2380412 - 2380816 | 14495.5 |
| acidic protein msyb | CFA70_RS12270 | Not Available | Positive | 2380850 - 2381563 | 26444.1 |
| acetate uptake transporter | CFA70_RS12275 | Not Available | Positive | 2381712 - 2382278 | 19998.1 |
| mfs transporter | CFA70_RS12280 | Not Available | Negative | 2382312 - 2383619 | 47336.5 |
| molybdopterin adenylyltransferase | CFA70_RS12285 | Not Available | Negative | 2383744 - 2384331 | 21053.5 |
| transaldolase | CFA70_RS12290 | Not Available | Negative | 2384442 - 2385395 | 35093.1 |
| alanine/glycine:cation symporter family protein | CFA70_RS12295 | Not Available | Positive | 2385670 - 2387100 | 51456.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

