Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CFA70_RS12200 | Not Available | Negative | 2364209 - 2365159 | 34489.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CFA70_RS12205 | Not Available | Negative | 2365161 - 2365610 | 16065.9 |
| signal peptidase ii | CFA70_RS12210 | Not Available | Negative | 2365728 - 2366225 | 18291.6 |
| isoleucine--trna ligase | CFA70_RS12215 | Not Available | Negative | 2366225 - 2369041 | 104142.0 |
| bifunctional riboflavin kinase/fad synthetase | CFA70_RS12220 | Not Available | Negative | 2369079 - 2370017 | 34556.0 |
| duf968 domain-containing protein | CFA70_RS29600 | Not Available | Negative | 2370025 - 2370228 | 7723.59 |
| 30s ribosomal protein s20 | CFA70_RS12230 | Not Available | Positive | 2370346 - 2370609 | 9685.97 |
| mfs transporter | CFA70_RS12235 | Not Available | Positive | 2371073 - 2372446 | 50085.1 |
| tim-barrel domain-containing protein | CFA70_RS12240 | Not Available | Positive | 2372487 - 2374526 | 78642.2 |
| transcriptional activator nhar | CFA70_RS12245 | Not Available | Negative | 2374576 - 2375475 | 34073.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

