Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa dehydrogenase | CFA70_RS12150 | Not Available | Positive | 2351116 - 2352258 | 42485.7 |
| l-carnitine coa-transferase | CFA70_RS12155 | Not Available | Positive | 2352364 - 2353581 | 44926.1 |
| crotonobetaine/carnitine-coa ligase | CFA70_RS12160 | Not Available | Positive | 2353643 - 2355196 | 58309.9 |
| crotonobetainyl-coa hydratase | CFA70_RS12165 | Not Available | Positive | 2355251 - 2356036 | 28154.7 |
| carnitine operon protein caie | CFA70_RS12170 | Not Available | Positive | 2356043 - 2356639 | 21484.9 |
| carnitine metabolism transcriptional regulator caif | CFA70_RS12175 | Not Available | Negative | 2356715 - 2357110 | 15347.9 |
| carbamoyl-phosphate synthase large subunit | CFA70_RS12180 | Not Available | Negative | 2357384 - 2360611 | 118083.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | CFA70_RS12185 | Not Available | Negative | 2360629 - 2361777 | 41267.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CFA70_RS12190 | Not Available | Negative | 2362233 - 2363054 | 28880.6 |
| ribonucleoside hydrolase rihc | CFA70_RS12195 | Not Available | Negative | 2363228 - 2364142 | 32750.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

