Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | CFA70_RS11995 | Not Available | Positive | 2315753 - 2317363 | 59586.8 |
| thiamine abc transporter atp-binding protein thiq | CFA70_RS12000 | Not Available | Positive | 2317347 - 2318045 | 25194.8 |
| deda family protein | CFA70_RS12005 | Not Available | Negative | 2318090 - 2318857 | 28401.0 |
| hypothetical protein | CFA70_RS12010 | Not Available | Negative | 2319023 - 2319445 | 16956.1 |
| hypothetical protein | CFA70_RS12015 | Not Available | Negative | 2319454 - 2320299 | 32721.6 |
| arabinose operon transcriptional regulator arac | CFA70_RS12020 | Not Available | Negative | 2320467 - 2321312 | 32124.2 |
| ribulokinase | CFA70_RS12025 | Not Available | Positive | 2321652 - 2323361 | 61864.5 |
| l-arabinose isomerase | CFA70_RS12030 | Not Available | Positive | 2323372 - 2324874 | 56033.1 |
| l-ribulose-5-phosphate 4-epimerase | CFA70_RS12035 | Not Available | Positive | 2324972 - 2325667 | 25547.4 |
| duf4751 family protein | CFA70_RS12040 | Not Available | Negative | 2325708 - 2326091 | 14928.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

