Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | CFA70_RS11945 | Not Available | Positive | 2304550 - 2305641 | 39470.2 |
| 3-isopropylmalate dehydratase large subunit | CFA70_RS11950 | Not Available | Positive | 2305644 - 2307044 | 49763.5 |
| 3-isopropylmalate dehydratase small subunit | CFA70_RS11955 | Not Available | Positive | 2307055 - 2307660 | 22558.7 |
| dna-binding transcriptional regulator idnr | CFA70_RS11960 | Not Available | Negative | 2307706 - 2308698 | 36699.1 |
| mfs transporter | CFA70_RS11965 | Not Available | Negative | 2308781 - 2310064 | 47603.3 |
| gluconate 5-dehydrogenase | CFA70_RS11970 | Not Available | Negative | 2310123 - 2310887 | 27452.1 |
| sugar efflux transporter | CFA70_RS11975 | Not Available | Negative | 2311166 - 2312344 | 42682.9 |
| duf968 domain-containing protein | CFA70_RS11980 | Not Available | Negative | 2312718 - 2312851 | 4862.82 |
| hth-type transcriptional regulator sgrr | CFA70_RS11985 | Not Available | Positive | 2312951 - 2314606 | 63982.8 |
| thiamine abc transporter substrate binding subunit | CFA70_RS11990 | Not Available | Positive | 2314794 - 2315777 | 36384.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

