Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CFA70_RS11745 | Not Available | Negative | 2258241 - 2260904 | 99662.0 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | CFA70_RS11750 | Not Available | Negative | 2261068 - 2261832 | 29320.1 |
| aromatic amino acid transporter arop | CFA70_RS11755 | Not Available | Positive | 2262397 - 2263770 | 49613.9 |
| glycoside-pentoside-hexuronide (gph):cation symporter | CFA70_RS11760 | Not Available | Positive | 2263928 - 2265334 | 52968.7 |
| family 43 glycosylhydrolase | CFA70_RS11765 | Not Available | Positive | 2265334 - 2266284 | 36573.8 |
| beta-lactamase regulator ampe | CFA70_RS11770 | Not Available | Negative | 2266377 - 2267231 | 32112.8 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CFA70_RS11775 | Not Available | Negative | 2267228 - 2267791 | 20848.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | CFA70_RS11780 | Not Available | Positive | 2267879 - 2268772 | 32930.1 |
| prepilin peptidase-dependent pilin | CFA70_RS11785 | Not Available | Positive | 2269016 - 2269453 | 15730.9 |
| type ii secretion system protein gspe | CFA70_RS11790 | Not Available | Positive | 2269463 - 2270845 | 50427.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

