Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-threonate 4-phosphate dehydrogenase | CFA70_RS11690 | Not Available | Negative | 2244392 - 2245375 | 35254.8 |
| d-threonate kinase | CFA70_RS11695 | Not Available | Negative | 2245365 - 2246636 | 45035.5 |
| 2-keto-3-deoxygluconate permease 1 | CFA70_RS11700 | Not Available | Negative | 2246633 - 2247586 | 31729.8 |
| protein yacl | CFA70_RS11705 | Not Available | Negative | 2247768 - 2248130 | 13935.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | CFA70_RS11710 | Not Available | Negative | 2248305 - 2250902 | 93540.5 |
| duf3300 domain-containing protein | CFA70_RS11720 | Not Available | Positive | 2251351 - 2252943 | 58378.9 |
| duf2950 family protein | CFA70_RS11725 | Not Available | Positive | 2252954 - 2253748 | 29046.0 |
| complement resistance protein trat | CFA70_RS11730 | Not Available | Negative | 2253811 - 2254542 | 25763.0 |
| dihydrolipoyl dehydrogenase | CFA70_RS11735 | Not Available | Negative | 2254737 - 2256161 | 50555.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | CFA70_RS11740 | Not Available | Negative | 2256337 - 2258226 | 65672.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

