Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CFA70_RS11525 | Not Available | Positive | 2215669 - 2216148 | 17909.5 |
| fimbrial protein | CFA70_RS11530 | Not Available | Positive | 2216825 - 2217403 | 19755.9 |
| fimbrial chaperone | CFA70_RS11535 | Not Available | Positive | 2217479 - 2218222 | 27024.4 |
| outer membrane usher protein | CFA70_RS11540 | Not Available | Positive | 2218252 - 2220855 | 95214.0 |
| fimbrial protein | CFA70_RS11545 | Not Available | Positive | 2220872 - 2221444 | 20345.0 |
| fimbrial protein | CFA70_RS11550 | Not Available | Positive | 2221461 - 2222057 | 20425.7 |
| fimbrial-like protein | CFA70_RS11555 | Not Available | Positive | 2222057 - 2222632 | 20357.9 |
| is1-like element is1b family transposase | CFA70_RS11560 | Not Available | Negative | 2222989 - 2223686 | 26558.3 |
| fimbrial protein | CFA70_RS11570 | Not Available | Positive | 2224163 - 2224762 | 21085.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CFA70_RS11575 | Not Available | Positive | 2224878 - 2225669 | 28226.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

