Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf968 domain-containing protein | CFA70_RS11470 | Not Available | Negative | 2201750 - 2204232 | 91668.5 |
| molecular chaperone | CFA70_RS11475 | Not Available | Negative | 2204265 - 2204978 | 26422.9 |
| fimbrial protein | CFA70_RS11480 | Not Available | Negative | 2205029 - 2205571 | 18950.2 |
| bifunctional glycosyl transferase/transpeptidase | CFA70_RS11490 | Not Available | Negative | 2206136 - 2208673 | 94436.2 |
| atp-dependent helicase hrpb | CFA70_RS11495 | Not Available | Negative | 2208851 - 2211280 | 89271.5 |
| rna 2',3'-cyclic phosphodiesterase | CFA70_RS11500 | Not Available | Positive | 2211354 - 2211884 | 19823.9 |
| dna/rna nuclease sfsa | CFA70_RS11505 | Not Available | Positive | 2211900 - 2212604 | 26006.2 |
| rna polymerase-binding protein dksa | CFA70_RS11510 | Not Available | Positive | 2212781 - 2213236 | 17530.7 |
| duf968 domain-containing protein | CFA70_RS11515 | Not Available | Positive | 2213307 - 2214174 | 33037.4 |
| polynucleotide adenylyltransferase pcnb | CFA70_RS11520 | Not Available | Positive | 2214275 - 2215672 | 53969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

